Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm7627-201ENSMUST00000183205 999 ntBASIC11.22□□□□□ -0.61
Atxn1P54254 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm6606-201ENSMUST00000193613 947 ntBASIC11.22□□□□□ -0.61
Atxn1P54254 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm29808-201ENSMUST00000194419 468 ntBASIC11.22□□□□□ -0.61
Atxn1P54254 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm9204-201ENSMUST00000212641 947 ntBASIC11.22□□□□□ -0.61
Atxn1P54254 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Gm6331-201ENSMUST00000217890 450 ntBASIC11.22□□□□□ -0.61
Atxn1P54254 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Atxn1P54254 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Atxn1P54254 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Atxn1P54254 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Atxn1P54254 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Atxn1P54254 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
Atxn1P54254 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Gm15196-201ENSMUST00000121406 482 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 Gm7741-201ENSMUST00000181445 989 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.21□□□□□ -0.61
Atxn1P54254 Gm8384-201ENSMUST00000190905 704 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 Gm7504-201ENSMUST00000201449 424 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 Gm7940-201ENSMUST00000218195 769 ntBASIC11.21□□□□□ -0.61
Atxn1P54254 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.21□□□□□ -0.61
Atxn1P54254 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Atxn1P54254 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Atxn1P54254 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Atxn1P54254 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Atxn1P54254 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Atxn1P54254 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Atxn1P54254 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Atxn1P54254 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Atxn1P54254 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gm23612-201ENSMUST00000103823 110 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gm13039-201ENSMUST00000118638 794 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm13422-201ENSMUST00000118834 504 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm15610-201ENSMUST00000120584 195 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm16305-201ENSMUST00000140747 556 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gm27956-201ENSMUST00000175604 260 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm26272-201ENSMUST00000179241 132 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Gm23576-201ENSMUST00000179918 110 ntBASIC11.2□□□□□ -0.62
Atxn1P54254 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Atxn1P54254 Gm6450-201ENSMUST00000200896 574 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms