Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sox3P53784 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox3P53784 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox3P53784 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gm14807-201ENSMUST00000116640 983 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Sox3P53784 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.82□□□□□ -0.68
Sox3P53784 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Ighv1-2-201ENSMUST00000195325 378 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Gm42433-201ENSMUST00000196806 940 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.82□□□□□ -0.68
Sox3P53784 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Gm16380-201ENSMUST00000077997 478 ntBASIC10.82□□□□□ -0.68
Sox3P53784 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.82□□□□□ -0.68
Sox3P53784 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox3P53784 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox3P53784 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox3P53784 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox3P53784 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox3P53784 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sox3P53784 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox3P53784 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Sox3P53784 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Gm11578-201ENSMUST00000118530 459 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Gm10169-201ENSMUST00000121822 348 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox3P53784 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox3P53784 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Sox3P53784 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Gm6390-201ENSMUST00000215034 589 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.81□□□□□ -0.68
Sox3P53784 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.81□□□□□ -0.68
Sox3P53784 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox3P53784 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sox3P53784 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Sox3P53784 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox3P53784 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms