Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Vps4bP46467 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Vps4bP46467 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.42□□□□□ -0.58
Vps4bP46467 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Vps4bP46467 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.41□□□□□ -0.58
Vps4bP46467 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.41□□□□□ -0.58
Vps4bP46467 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Vps4bP46467 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Vps4bP46467 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Vps4bP46467 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.41□□□□□ -0.58
Vps4bP46467 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.41□□□□□ -0.58
Vps4bP46467 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.41□□□□□ -0.58
Vps4bP46467 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.41□□□□□ -0.58
Vps4bP46467 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Vps4bP46467 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Vps4bP46467 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.41□□□□□ -0.58
Vps4bP46467 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Vps4bP46467 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Gm12407-201ENSMUST00000180219 324 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm5996-201ENSMUST00000211110 718 ntBASIC11.4□□□□□ -0.58
Vps4bP46467 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.4□□□□□ -0.58
Vps4bP46467 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.4□□□□□ -0.58
Vps4bP46467 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Vps4bP46467 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms