Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fen1P39749 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm12463-201ENSMUST00000118271 849 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Gm14109-201ENSMUST00000118814 309 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Gm14726-201ENSMUST00000120623 896 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fen1P39749 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.3□□□□□ -0.6
Fen1P39749 Gm5363-201ENSMUST00000211927 938 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Fen1P39749 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.3□□□□□ -0.6
Fen1P39749 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fen1P39749 Spata33-207ENSMUST00000212760 4074 ntBASIC11.3□□□□□ -0.6
Fen1P39749 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Fen1P39749 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.29□□□□□ -0.6
Fen1P39749 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm26286-201ENSMUST00000104166 134 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.29□□□□□ -0.6
Fen1P39749 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.29□□□□□ -0.6
Fen1P39749 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.29□□□□□ -0.6
Fen1P39749 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fen1P39749 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Gm26461-201ENSMUST00000175064 290 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.29□□□□□ -0.6
Fen1P39749 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.29□□□□□ -0.6
Fen1P39749 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm5982-201ENSMUST00000196234 512 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Gm18753-201ENSMUST00000201000 566 ntBASIC11.29□□□□□ -0.6
Fen1P39749 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fen1P39749 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fen1P39749 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Fen1P39749 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.29□□□□□ -0.6
Fen1P39749 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.29□□□□□ -0.6
Fen1P39749 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.29□□□□□ -0.6
Fen1P39749 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Fen1P39749 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms