Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Upk2P38575 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.84□□□□□ -0.83
Upk2P38575 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Upk2P38575 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Upk2P38575 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Upk2P38575 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Upk2P38575 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Gm15573-201ENSMUST00000119487 540 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Gm12566-201ENSMUST00000121479 359 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Upk2P38575 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Upk2P38575 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.83□□□□□ -0.84
Upk2P38575 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Gm45398-201ENSMUST00000210561 165 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.83□□□□□ -0.84
Upk2P38575 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Upk2P38575 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Upk2P38575 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.83□□□□□ -0.84
Upk2P38575 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Upk2P38575 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Upk2P38575 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Upk2P38575 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.82□□□□□ -0.84
Upk2P38575 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.82□□□□□ -0.84
Upk2P38575 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Upk2P38575 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.82□□□□□ -0.84
Upk2P38575 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Upk2P38575 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Upk2P38575 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms