Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.28□□□□□ -0.76
Nedd8P29595 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm14057-201ENSMUST00000120631 482 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Mir1894-201ENSMUST00000122802 81 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.28□□□□□ -0.76
Nedd8P29595 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm25226-201ENSMUST00000158198 123 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.28□□□□□ -0.76
Nedd8P29595 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nedd8P29595 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm44798-201ENSMUST00000208123 2410 ntBASIC10.28□□□□□ -0.76
Nedd8P29595 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.28□□□□□ -0.76
Nedd8P29595 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nedd8P29595 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nedd8P29595 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.27□□□□□ -0.76
Nedd8P29595 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nedd8P29595 Gm37003-201ENSMUST00000194702 2827 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nedd8P29595 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.27□□□□□ -0.77
Nedd8P29595 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Nedd8P29595 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.27□□□□□ -0.77
Nedd8P29595 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm1335-201ENSMUST00000121653 386 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nedd8P29595 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm28937-201ENSMUST00000185413 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm29400-201ENSMUST00000187208 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm28662-201ENSMUST00000188446 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm28251-201ENSMUST00000188835 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm37318-201ENSMUST00000194325 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm38017-201ENSMUST00000194768 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm38321-201ENSMUST00000195053 235 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm37287-201ENSMUST00000195449 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm37793-201ENSMUST00000195548 695 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.27□□□□□ -0.77
Nedd8P29595 Gm44008-201ENSMUST00000204345 412 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.27□□□□□ -0.77
Nedd8P29595 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.27□□□□□ -0.77
Nedd8P29595 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nedd8P29595 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Nedd8P29595 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms