Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vcam1P29533 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vcam1P29533 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vcam1P29533 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
Vcam1P29533 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.88□□□□□ -0.35
Vcam1P29533 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vcam1P29533 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Vcam1P29533 Gm7541-201ENSMUST00000118361 535 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Gm16547-201ENSMUST00000159474 293 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcam1P29533 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vcam1P29533 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vcam1P29533 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vcam1P29533 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.88□□□□□ -0.35
Vcam1P29533 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.88□□□□□ -0.35
Vcam1P29533 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vcam1P29533 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vcam1P29533 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vcam1P29533 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vcam1P29533 Gm11475-201ENSMUST00000118482 476 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm11993-201ENSMUST00000121861 820 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcam1P29533 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vcam1P29533 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm29763-201ENSMUST00000205306 616 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm44605-201ENSMUST00000206892 949 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm45258-201ENSMUST00000210042 853 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.87□□□□□ -0.35
Vcam1P29533 AC153962.2-201ENSMUST00000219417 550 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.87□□□□□ -0.35
Vcam1P29533 Gm26782-203ENSMUST00000227103 751 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm5449-201ENSMUST00000081132 357 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.87□□□□□ -0.35
Vcam1P29533 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Vcam1P29533 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.87□□□□□ -0.35
Vcam1P29533 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vcam1P29533 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.86□□□□□ -0.35
Vcam1P29533 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vcam1P29533 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vcam1P29533 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vcam1P29533 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vcam1P29533 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.86□□□□□ -0.35
Vcam1P29533 Mir1893-201ENSMUST00000122565 83 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms