Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm8194-201ENSMUST00000159783 859 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Gm8723-201ENSMUST00000166076 820 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Gm8701-201ENSMUST00000169259 874 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.36□□□□□ -0.91
Col8a2P25318 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC9.36□□□□□ -0.91
Col8a2P25318 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.36□□□□□ -0.91
Col8a2P25318 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Gm18514-201ENSMUST00000218980 436 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.36□□□□□ -0.91
Col8a2P25318 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.36□□□□□ -0.91
Col8a2P25318 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Col8a2P25318 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col8a2P25318 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col8a2P25318 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm14892-201ENSMUST00000117636 267 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Gm13284-201ENSMUST00000121020 547 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm19246-201ENSMUST00000173599 255 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col8a2P25318 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm5700-201ENSMUST00000191483 989 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm7525-201ENSMUST00000219425 454 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Col8a2P25318 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.35□□□□□ -0.91
Col8a2P25318 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col8a2P25318 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col8a2P25318 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms