Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6bP23440 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Gm18514-201ENSMUST00000218980 436 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pde6bP23440 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.35□□□□□ -0.43
Pde6bP23440 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.35□□□□□ -0.43
Pde6bP23440 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.35□□□□□ -0.43
Pde6bP23440 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.35□□□□□ -0.43
Pde6bP23440 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pde6bP23440 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.34□□□□□ -0.43
Pde6bP23440 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6bP23440 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6bP23440 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pde6bP23440 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.34□□□□□ -0.43
Pde6bP23440 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm20495-201ENSMUST00000173902 235 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.34□□□□□ -0.43
Pde6bP23440 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6bP23440 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pde6bP23440 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.34□□□□□ -0.43
Pde6bP23440 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pde6bP23440 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pde6bP23440 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Pde6bP23440 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Pde6bP23440 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pde6bP23440 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.43
Pde6bP23440 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pde6bP23440 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pde6bP23440 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
Pde6bP23440 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.33□□□□□ -0.44
Pde6bP23440 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pde6bP23440 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pde6bP23440 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pde6bP23440 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.33□□□□□ -0.44
Pde6bP23440 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.33□□□□□ -0.44
Pde6bP23440 Gm23694-201ENSMUST00000179335 110 ntBASIC12.33□□□□□ -0.44
Pde6bP23440 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms