Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.83□□□□□ -0.52
Zfp42P22227 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Zfp42P22227 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp42P22227 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp42P22227 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Zfp42P22227 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Zfp42P22227 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Zfp42P22227 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm8566-201ENSMUST00000120174 465 ntBASIC11.82□□□□□ -0.52
Zfp42P22227 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.82□□□□□ -0.52
Zfp42P22227 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Zfp42P22227 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm10288-201ENSMUST00000084614 537 ntBASIC11.82□□□□□ -0.52
Zfp42P22227 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Zfp42P22227 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.82□□□□□ -0.52
Zfp42P22227 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.82□□□□□ -0.52
Zfp42P22227 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.82□□□□□ -0.52
Zfp42P22227 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Zfp42P22227 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Zfp42P22227 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.81□□□□□ -0.52
Zfp42P22227 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.81□□□□□ -0.52
Zfp42P22227 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.81□□□□□ -0.52
Zfp42P22227 Gm25881-201ENSMUST00000157783 103 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Gm26083-201ENSMUST00000157904 193 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.81□□□□□ -0.52
Zfp42P22227 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Zfp42P22227 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Gm2965-201ENSMUST00000198365 343 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Gm6439-201ENSMUST00000199849 862 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.81□□□□□ -0.52
Zfp42P22227 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Zfp42P22227 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Zfp42P22227 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp42P22227 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Zfp42P22227 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms