Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Hmga1P17095 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.44□□□□□ -0.58
Hmga1P17095 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmga1P17095 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hmga1P17095 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.43□□□□□ -0.58
Hmga1P17095 Gm11619-201ENSMUST00000117474 237 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Gm11380-201ENSMUST00000118067 560 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Gm15003-201ENSMUST00000118884 446 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmga1P17095 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Gm9372-201ENSMUST00000168454 430 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Gm24328-201ENSMUST00000175104 67 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmga1P17095 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Gm34379-201ENSMUST00000195036 290 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.43□□□□□ -0.58
Hmga1P17095 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmga1P17095 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmga1P17095 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hmga1P17095 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hmga1P17095 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hmga1P17095 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Hmga1P17095 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Gm18201-201ENSMUST00000174735 875 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Gm25951-201ENSMUST00000175330 64 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.42□□□□□ -0.58
Hmga1P17095 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.42□□□□□ -0.58
Hmga1P17095 Gm42430-201ENSMUST00000197209 616 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Gm44647-201ENSMUST00000207402 428 ntBASIC11.42□□□□□ -0.58
Hmga1P17095 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Hmga1P17095 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmga1P17095 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hmga1P17095 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.41□□□□□ -0.58
Hmga1P17095 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.41□□□□□ -0.58
Hmga1P17095 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmga1P17095 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms