Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm12463-201ENSMUST00000118271 849 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm5656-201ENSMUST00000171020 1096 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm4654-201ENSMUST00000183305 982 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm37981-201ENSMUST00000194280 535 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm43852-201ENSMUST00000202098 917 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PdgfrbP05622 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.44□□□□□ -0.58
PdgfrbP05622 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
PdgfrbP05622 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
PdgfrbP05622 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.44□□□□□ -0.58
PdgfrbP05622 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 AC140393.3-201ENSMUST00000228396 1352 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm16570-201ENSMUST00000161951 436 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Mir6979-201ENSMUST00000183927 56 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Mir6546-201ENSMUST00000184460 62 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm43186-201ENSMUST00000198130 824 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.43□□□□□ -0.58
PdgfrbP05622 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.43□□□□□ -0.58
PdgfrbP05622 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
PdgfrbP05622 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.42□□□□□ -0.58
PdgfrbP05622 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.42□□□□□ -0.58
PdgfrbP05622 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PdgfrbP05622 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms