Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.46□□□□□ -0.89
Hoxa3P02831 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.46□□□□□ -0.89
Hoxa3P02831 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.46□□□□□ -0.89
Hoxa3P02831 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.46□□□□□ -0.89
Hoxa3P02831 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxa3P02831 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Hoxa3P02831 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm14071-201ENSMUST00000117817 509 ntBASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm11700-201ENSMUST00000119409 403 ntBASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Hoxa3P02831 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.46□□□□□ -0.9
Hoxa3P02831 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.46□□□□□ -0.9
Hoxa3P02831 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Hoxa3P02831 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hoxa3P02831 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm15374-201ENSMUST00000119313 844 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm15549-201ENSMUST00000121595 622 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm25072-201ENSMUST00000175233 235 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm7741-201ENSMUST00000181445 989 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm37826-201ENSMUST00000195329 322 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm5996-201ENSMUST00000211110 718 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.45□□□□□ -0.9
Hoxa3P02831 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Hoxa3P02831 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hoxa3P02831 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms