Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Rnf13O54965 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Rnf13O54965 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Gm43758-201ENSMUST00000199500 367 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Gm3961-201ENSMUST00000204425 994 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.17□□□□□ -0.78
Rnf13O54965 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Rnf13O54965 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rnf13O54965 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.17□□□□□ -0.78
Rnf13O54965 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf13O54965 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.16□□□□□ -0.78
Rnf13O54965 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm27320-201ENSMUST00000184892 109 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 Gm28071-201ENSMUST00000190355 478 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm6722-201ENSMUST00000221586 390 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Rnf13O54965 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rnf13O54965 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.16□□□□□ -0.78
Rnf13O54965 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rnf13O54965 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms