Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm29245-201ENSMUST00000187332 1416 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm5159-201ENSMUST00000212733 1652 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gm43127-201ENSMUST00000195890 2789 ntBASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc180J3QNE4 Mir291b-201ENSMUST00000104838 79 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm6630-201ENSMUST00000119199 454 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm5510-201ENSMUST00000117826 486 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm42689-201ENSMUST00000202403 404 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 AC154461.3-201ENSMUST00000224831 573 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 AC164099.1-201ENSMUST00000227780 333 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm2128-201ENSMUST00000108009 2560 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Gm12716-201ENSMUST00000120606 1354 ntBASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc180J3QNE4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Gm5335-201ENSMUST00000182995 1000 ntBASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc180J3QNE4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ccdc180J3QNE4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Gm28671-201ENSMUST00000187036 692 ntBASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Gm21136-201ENSMUST00000186812 2575 ntBASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Gm6605-201ENSMUST00000031488 2574 ntBASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc180J3QNE4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc180J3QNE4 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms