Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm8152-201ENSMUST00000120842 637 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm13281-201ENSMUST00000120871 567 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm14441-201ENSMUST00000121960 540 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm14006-201ENSMUST00000122132 981 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm24992-201ENSMUST00000157412 130 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm22388-201ENSMUST00000158194 248 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm29067-201ENSMUST00000190821 470 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm18001-201ENSMUST00000212023 688 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.58□□□□□ -0.24
NpcdF8VQB8 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NpcdF8VQB8 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm13192-201ENSMUST00000101199 208 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm10443-201ENSMUST00000119024 210 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm12345-201ENSMUST00000119288 898 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm14113-201ENSMUST00000121399 976 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm15982-201ENSMUST00000121681 554 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm20568-201ENSMUST00000197129 208 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 AC134913.2-201ENSMUST00000225017 771 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 AC154407.1-201ENSMUST00000226777 526 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Gm7589-201ENSMUST00000085631 534 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NpcdF8VQB8 Map1b-203ENSMUST00000223725 2669 ntBASIC13.57□□□□□ -0.24
NpcdF8VQB8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.56□□□□□ -0.24
NpcdF8VQB8 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NpcdF8VQB8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms