Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc149F6V035 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc149F6V035 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc149F6V035 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc149F6V035 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm11980-201ENSMUST00000121445 986 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm8451-201ENSMUST00000170338 447 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm9111-201ENSMUST00000219394 709 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Id2-203ENSMUST00000222667 958 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm7536-201ENSMUST00000077389 444 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm5453-201ENSMUST00000080866 447 ntBASIC11.44□□□□□ -0.58
Ccdc149F6V035 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc149F6V035 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm14993-201ENSMUST00000121180 164 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm8723-201ENSMUST00000166076 820 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm8701-201ENSMUST00000169259 874 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm18463-201ENSMUST00000207258 474 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm18460-201ENSMUST00000208088 464 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Gm8255-201ENSMUST00000218693 305 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.43□□□□□ -0.58
Ccdc149F6V035 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ccdc149F6V035 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms