Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm42859-201ENSMUST00000199572 193 ntBASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm14832-201ENSMUST00000121289 322 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm6450-201ENSMUST00000200896 574 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm31941-201ENSMUST00000209689 350 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm10268-201ENSMUST00000085340 555 ntBASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccnb1ip1D3Z3K2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccnb1ip1D3Z3K2 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms