Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm14807-201ENSMUST00000116640 983 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm8312-201ENSMUST00000119380 618 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm3828-201ENSMUST00000121817 257 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm5970-201ENSMUST00000131638 1216 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm26736-201ENSMUST00000180425 1236 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm19540-201ENSMUST00000221843 810 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 AC129597.1-201ENSMUST00000223046 1234 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm16380-201ENSMUST00000077997 478 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ube3bQ9ES34 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm12663-201ENSMUST00000118481 958 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Snord55-201ENSMUST00000174939 79 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Ube3bQ9ES34 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Gm12986-201ENSMUST00000119037 967 ntBASIC13.41□□□□□ -0.26
Ube3bQ9ES34 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ube3bQ9ES34 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms