Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm14071-201ENSMUST00000117817 509 ntBASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm12579-201ENSMUST00000118040 783 ntBASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Tubb3Q9ERD7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm13888-201ENSMUST00000119148 422 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm4726-201ENSMUST00000135604 736 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm7666-201ENSMUST00000146631 819 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm6019-201ENSMUST00000148369 736 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm17831-201ENSMUST00000205579 900 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm44545-201ENSMUST00000208262 746 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tubb3Q9ERD7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms