Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm9035-201ENSMUST00000218318 1697 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Gm43014-201ENSMUST00000198568 2443 ntBASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4bQ9D8B3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Gm19246-201ENSMUST00000173599 255 ntBASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Gm21092-201ENSMUST00000178995 955 ntBASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4bQ9D8B3 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm8111-201ENSMUST00000117659 987 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm18367-201ENSMUST00000176139 600 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm23694-201ENSMUST00000179335 110 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm4654-201ENSMUST00000183305 982 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm19353-201ENSMUST00000184561 445 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm5302-201ENSMUST00000202130 796 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm17831-201ENSMUST00000205579 900 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4bQ9D8B3 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms