Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.77□□□□□ -0.04
U2af1Q9D883 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.77□□□□□ -0.04
U2af1Q9D883 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
U2af1Q9D883 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
U2af1Q9D883 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
U2af1Q9D883 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.77□□□□□ -0.05
U2af1Q9D883 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.77□□□□□ -0.05
U2af1Q9D883 Gm12274-201ENSMUST00000120062 385 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 Gm25343-201ENSMUST00000157460 107 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 Gm10020-201ENSMUST00000081993 612 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.77□□□□□ -0.05
U2af1Q9D883 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
U2af1Q9D883 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
U2af1Q9D883 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm22442-201ENSMUST00000157256 144 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm9369-201ENSMUST00000196009 733 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
U2af1Q9D883 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.76□□□□□ -0.05
U2af1Q9D883 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
U2af1Q9D883 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm14270-201ENSMUST00000118388 846 ntBASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
U2af1Q9D883 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.75□□□□□ -0.05
U2af1Q9D883 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm3726-201ENSMUST00000203110 785 ntBASIC14.75□□□□□ -0.05
U2af1Q9D883 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.75□□□□□ -0.05
U2af1Q9D883 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.75□□□□□ -0.05
U2af1Q9D883 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms