Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm15549-201ENSMUST00000121595 622 ntBASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Khdc3Q9CWU5 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm18367-201ENSMUST00000176139 600 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm7741-201ENSMUST00000181445 989 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm19353-201ENSMUST00000184561 445 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm9555-201ENSMUST00000200908 583 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm45856-201ENSMUST00000212752 416 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Gm2517-201ENSMUST00000215651 348 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Khdc3Q9CWU5 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms