Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm22133-201ENSMUST00000102082 109 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm14726-201ENSMUST00000120623 896 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm2991-201ENSMUST00000173338 480 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm4157-201ENSMUST00000211647 679 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm17827-201ENSMUST00000211825 742 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nudcd2Q9CQ48 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm11509-201ENSMUST00000117358 325 ntBASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm26047-201ENSMUST00000157308 113 ntBASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm26047-202ENSMUST00000198840 115 ntBASIC9.62□□□□□ -0.87
Nudcd2Q9CQ48 Gm9353-201ENSMUST00000200472 604 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms