Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.67□□□□□ -0.7
Ska1Q9CPV1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ska1Q9CPV1 AC160340.2-201ENSMUST00000220812 3675 ntBASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Mir8093-201ENSMUST00000185043 137 ntBASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm18038-201ENSMUST00000197900 485 ntBASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ska1Q9CPV1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm14130-201ENSMUST00000118417 987 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm13996-201ENSMUST00000118456 430 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm13350-201ENSMUST00000120519 479 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm45224-201ENSMUST00000208203 414 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Olfr582-201ENSMUST00000098212 960 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ska1Q9CPV1 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms