Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh23Q99PF4 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm28391-201ENSMUST00000185202 379 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm29528-201ENSMUST00000186699 379 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm29526-201ENSMUST00000187217 379 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm13215-201ENSMUST00000117559 472 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm13217-201ENSMUST00000120466 953 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm11191-201ENSMUST00000117231 610 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm2021-201ENSMUST00000190623 464 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Gm37944-201ENSMUST00000194233 414 ntBASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh23Q99PF4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm13857-201ENSMUST00000139645 173 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm27383-201ENSMUST00000184418 361 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm35412-201ENSMUST00000220437 999 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Lect2-202ENSMUST00000225183 823 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm10020-201ENSMUST00000081993 612 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 AC147366.2-201ENSMUST00000226859 2038 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm6426-201ENSMUST00000209048 854 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 AC122356.2-201ENSMUST00000226962 820 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms