Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkd1Q99MH6 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm45331-201ENSMUST00000209868 554 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm6722-201ENSMUST00000221586 390 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm8385-201ENSMUST00000058999 643 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm10288-201ENSMUST00000084614 537 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkd1Q99MH6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm8566-201ENSMUST00000120174 465 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm12196-201ENSMUST00000120954 262 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm25881-201ENSMUST00000157783 103 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm19891-201ENSMUST00000189771 303 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm19087-201ENSMUST00000191430 946 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Gm18730-201ENSMUST00000218038 343 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Nkd1Q99MH6 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms