Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm14005-208ENSMUST00000223654 681 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm7536-201ENSMUST00000077389 444 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm5453-201ENSMUST00000080866 447 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm10263-201ENSMUST00000085163 300 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm9507-202ENSMUST00000180157 654 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm18801-201ENSMUST00000186616 536 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm43163-201ENSMUST00000196571 442 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 CT030135.2-201ENSMUST00000225255 893 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.91□□□□□ -0.82
Scrt1Q99M85 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Scrt1Q99M85 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms