Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp16Q99LG0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm12274-201ENSMUST00000120062 385 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm8492-201ENSMUST00000182375 987 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm37028-201ENSMUST00000194276 107 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Id2-203ENSMUST00000222667 958 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 AC154305.2-201ENSMUST00000225813 901 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm25580-201ENSMUST00000083409 327 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.34□□□□□ -0.11
Usp16Q99LG0 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp16Q99LG0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp16Q99LG0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Usp16Q99LG0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Usp16Q99LG0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.11
Usp16Q99LG0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp16Q99LG0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp16Q99LG0 Rubie-203ENSMUST00000227803 2430 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm14270-201ENSMUST00000118388 846 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm12791-201ENSMUST00000120788 655 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Snord55-201ENSMUST00000174939 79 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.33□□□□□ -0.12
Usp16Q99LG0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp16Q99LG0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.32□□□□□ -0.12
Usp16Q99LG0 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.32□□□□□ -0.12
Usp16Q99LG0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp16Q99LG0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms