Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm11500-201ENSMUST00000118237 601 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm12906-201ENSMUST00000154610 441 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm37826-201ENSMUST00000195329 322 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm45113-201ENSMUST00000207518 165 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhga6Q91XY2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm11996-201ENSMUST00000117538 915 ntBASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm15620-201ENSMUST00000122949 270 ntBASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms