Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.44□□□□□ -0.9
H1fooQ8VIK3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.44□□□□□ -0.9
H1fooQ8VIK3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
H1fooQ8VIK3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm11941-201ENSMUST00000119904 610 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm14716-201ENSMUST00000120138 718 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Olfml3-204ENSMUST00000169286 874 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Mir6927-201ENSMUST00000184494 71 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm9540-201ENSMUST00000188230 478 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Gm1821-202ENSMUST00000227415 750 ntBASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
H1fooQ8VIK3 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Gm37744-201ENSMUST00000194616 1590 ntBASIC9.42□□□□□ -0.9
H1fooQ8VIK3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
H1fooQ8VIK3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms