Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smc5Q8CG46 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm7851-201ENSMUST00000117574 323 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm11244-201ENSMUST00000121243 237 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm44506-201ENSMUST00000206278 965 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smc5Q8CG46 Gm42602-201ENSMUST00000200288 3224 ntBASIC13.85□□□□□ -0.19
Smc5Q8CG46 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm25492-201ENSMUST00000157383 129 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm24990-201ENSMUST00000157406 323 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm8574-201ENSMUST00000203207 924 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.84□□□□□ -0.19
Smc5Q8CG46 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smc5Q8CG46 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smc5Q8CG46 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc5Q8CG46 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Gm24891-201ENSMUST00000104391 136 ntBASIC13.83□□□□□ -0.2
Smc5Q8CG46 Gm14193-201ENSMUST00000105067 153 ntBASIC13.83□□□□□ -0.2
Smc5Q8CG46 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.83□□□□□ -0.2
Smc5Q8CG46 Gm11941-201ENSMUST00000119904 610 ntBASIC13.83□□□□□ -0.2
Smc5Q8CG46 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms