Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Brf1Q8CFK2 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brf1Q8CFK2 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm12029-201ENSMUST00000120073 832 ntBASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Mt1-202ENSMUST00000211807 1085 ntBASIC13.54□□□□□ -0.24
Brf1Q8CFK2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.54□□□□□ -0.24
Brf1Q8CFK2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brf1Q8CFK2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gm5523-201ENSMUST00000180415 997 ntBASIC13.53□□□□□ -0.24
Brf1Q8CFK2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms