Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm15953-201ENSMUST00000117656 1732 ntBASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc28bQ8CEG5 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.11□□□□□ -0.63
Ccdc28bQ8CEG5 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm15370-201ENSMUST00000117158 253 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm14109-201ENSMUST00000118814 309 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26047-201ENSMUST00000157308 113 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm8885-201ENSMUST00000189382 598 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm32999-201ENSMUST00000192693 562 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26047-202ENSMUST00000198840 115 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms