Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim9Q8C7M3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm14585-201ENSMUST00000120713 634 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm24074-201ENSMUST00000158178 260 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm3551-201ENSMUST00000190750 664 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm37826-201ENSMUST00000195329 322 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm30946-201ENSMUST00000198288 724 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim9Q8C7M3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm13611-201ENSMUST00000118269 318 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm13422-201ENSMUST00000118834 504 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm14942-201ENSMUST00000119642 336 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms