Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tsen54Q8C2A2 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm11573-201ENSMUST00000119956 394 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm15276-201ENSMUST00000145953 498 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm26083-201ENSMUST00000157904 193 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm6114-201ENSMUST00000182472 968 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm42937-201ENSMUST00000197360 752 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gm6082-201ENSMUST00000215204 454 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tsen54Q8C2A2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm15610-201ENSMUST00000120584 195 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm17376-201ENSMUST00000166016 84 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms