Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trub1Q8C0D0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm20426-201ENSMUST00000173657 440 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trub1Q8C0D0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.58□□□□□ -0.55
Trub1Q8C0D0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trub1Q8C0D0 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trub1Q8C0D0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trub1Q8C0D0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trub1Q8C0D0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gm37905-201ENSMUST00000195310 341 ntBASIC11.58□□□□□ -0.56
Trub1Q8C0D0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trub1Q8C0D0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trub1Q8C0D0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms