Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Gm7593-201ENSMUST00000187246 644 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sh3rf2Q8BZT2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Snord17-201ENSMUST00000104526 238 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11980-201ENSMUST00000121445 986 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm44216-201ENSMUST00000203942 157 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm44814-201ENSMUST00000207018 434 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm9102-201ENSMUST00000219250 465 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sh3rf2Q8BZT2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm4917-201ENSMUST00000121452 650 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm22146-201ENSMUST00000157397 288 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm37365-201ENSMUST00000193109 409 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Gm42660-201ENSMUST00000197733 947 ntBASIC11.4□□□□□ -0.58
Sh3rf2Q8BZT2 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms