Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Gm43966-201ENSMUST00000203301 612 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Rps4l-202ENSMUST00000204242 789 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Smco3Q8BQM7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm8956-201ENSMUST00000203939 825 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Smco3Q8BQM7 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Gm12390-201ENSMUST00000117897 397 ntBASIC9.22□□□□□ -0.93
Smco3Q8BQM7 Gm12463-201ENSMUST00000118271 849 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms