Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mir291b-201ENSMUST00000104838 79 ntBASIC15.73■□□□□ 0.11
Usp54Q8BL06 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm45090-201ENSMUST00000208775 1148 ntBASIC15.73■□□□□ 0.11
Usp54Q8BL06 AC133496.1-201ENSMUST00000223891 743 ntBASIC15.73■□□□□ 0.11
Usp54Q8BL06 AC163638.2-201ENSMUST00000224920 827 ntBASIC15.73■□□□□ 0.11
Usp54Q8BL06 AC134913.2-201ENSMUST00000225017 771 ntBASIC15.73■□□□□ 0.11
Usp54Q8BL06 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp54Q8BL06 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gm13286-201ENSMUST00000117750 537 ntBASIC15.72■□□□□ 0.11
Usp54Q8BL06 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 AC241616.1-201ENSMUST00000213741 166 ntBASIC15.72■□□□□ 0.11
Usp54Q8BL06 AC164883.7-201ENSMUST00000228534 851 ntBASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Klf10-203ENSMUST00000227920 2144 ntBASIC15.72■□□□□ 0.11
Usp54Q8BL06 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp54Q8BL06 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm13192-201ENSMUST00000101199 208 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm10443-201ENSMUST00000119024 210 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm25394-201ENSMUST00000157338 133 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm36982-201ENSMUST00000193796 1128 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm20568-201ENSMUST00000197129 208 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm7242-201ENSMUST00000221134 705 ntBASIC15.71■□□□□ 0.11
Usp54Q8BL06 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp54Q8BL06 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp54Q8BL06 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp54Q8BL06 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp54Q8BL06 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm42803-201ENSMUST00000201051 451 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm44236-201ENSMUST00000204492 513 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 AC134537.1-201ENSMUST00000219205 265 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 AC121357.1-201ENSMUST00000227365 608 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 AC103672.1-201ENSMUST00000227502 365 ntBASIC15.7■□□□□ 0.1
Usp54Q8BL06 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp54Q8BL06 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms