Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim50Q810I2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm8111-201ENSMUST00000117659 987 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm12463-201ENSMUST00000118271 849 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm16166-201ENSMUST00000118291 787 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm15615-201ENSMUST00000118876 198 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm8737-201ENSMUST00000122208 642 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm42997-202ENSMUST00000200321 985 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim50Q810I2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.97□□□□□ -0.65
Trim50Q810I2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim50Q810I2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm21778-201ENSMUST00000178779 471 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim50Q810I2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim50Q810I2 Gm5451-201ENSMUST00000080545 579 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.96□□□□□ -0.65
Trim50Q810I2 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trim50Q810I2 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trim50Q810I2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim50Q810I2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim50Q810I2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim50Q810I2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim50Q810I2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim50Q810I2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms