Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh19Q80TF3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm14270-201ENSMUST00000118388 846 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm23757-201ENSMUST00000158353 100 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm43163-201ENSMUST00000196571 442 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh19Q80TF3 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm14219-201ENSMUST00000120414 288 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Mir6958-201ENSMUST00000184207 73 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm29410-201ENSMUST00000188383 694 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm43380-201ENSMUST00000200421 220 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm19091-201ENSMUST00000208120 978 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Pcdh19Q80TF3 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.09□□□□□ -0.63
Pcdh19Q80TF3 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms