Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm12419-201ENSMUST00000116649 636 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm16166-201ENSMUST00000118291 787 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm5451-201ENSMUST00000080545 579 ntBASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Casc4Q6P2L7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm15615-201ENSMUST00000118876 198 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm6485-201ENSMUST00000160676 439 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm19459-201ENSMUST00000176240 835 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm44315-201ENSMUST00000203041 219 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm45398-201ENSMUST00000210561 165 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm23105-201ENSMUST00000083719 134 ntBASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Casc4Q6P2L7 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Casc4Q6P2L7 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms