Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Krt39Q6IFX4 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Snord17-201ENSMUST00000104526 238 ntBASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm16570-201ENSMUST00000161951 436 ntBASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.42□□□□□ -0.42
Krt39Q6IFX4 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm12266-201ENSMUST00000120311 962 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm2965-201ENSMUST00000198365 343 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms