Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm20836-201ENSMUST00000194582 696 ntBASIC10.25□□□□□ -0.77
VcanQ62059 Gm21660-201ENSMUST00000195789 696 ntBASIC10.25□□□□□ -0.77
VcanQ62059 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.25□□□□□ -0.77
VcanQ62059 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
VcanQ62059 AC120406.1-201ENSMUST00000220362 482 ntBASIC10.25□□□□□ -0.77
VcanQ62059 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
VcanQ62059 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
VcanQ62059 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.25□□□□□ -0.77
VcanQ62059 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VcanQ62059 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VcanQ62059 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 Gm38314-201ENSMUST00000195709 625 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.24□□□□□ -0.77
VcanQ62059 Gm3527-201ENSMUST00000198905 460 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VcanQ62059 AC167019.2-201ENSMUST00000227335 845 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
VcanQ62059 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Gm11929-201ENSMUST00000118175 945 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Gm6517-201ENSMUST00000121056 511 ntBASIC10.24□□□□□ -0.77
VcanQ62059 Gm14108-201ENSMUST00000122234 494 ntBASIC10.24□□□□□ -0.77
VcanQ62059 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.24□□□□□ -0.77
VcanQ62059 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.24□□□□□ -0.77
VcanQ62059 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VcanQ62059 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.24□□□□□ -0.77
VcanQ62059 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VcanQ62059 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VcanQ62059 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VcanQ62059 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm5400-201ENSMUST00000118494 943 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm14231-201ENSMUST00000120090 592 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm6695-201ENSMUST00000177264 1172 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm2021-201ENSMUST00000190623 464 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VcanQ62059 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm12947-201ENSMUST00000116114 420 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm14650-201ENSMUST00000120400 889 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm26532-201ENSMUST00000180630 690 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Mir6981-201ENSMUST00000184293 115 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm43833-201ENSMUST00000198828 293 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC10.23□□□□□ -0.77
VcanQ62059 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VcanQ62059 AC154669.1-201ENSMUST00000224405 482 ntBASIC10.23□□□□□ -0.77
VcanQ62059 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms