Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm27046-201ENSMUST00000182160 463 ntBASIC10.49□□□□□ -0.73
Sox17Q61473 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.49□□□□□ -0.73
Sox17Q61473 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.49□□□□□ -0.73
Sox17Q61473 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.49□□□□□ -0.73
Sox17Q61473 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.49□□□□□ -0.73
Sox17Q61473 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.49□□□□□ -0.73
Sox17Q61473 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.49□□□□□ -0.73
Sox17Q61473 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.49□□□□□ -0.73
Sox17Q61473 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sox17Q61473 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.48□□□□□ -0.73
Sox17Q61473 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sox17Q61473 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm14109-201ENSMUST00000118814 309 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm27530-201ENSMUST00000184096 98 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm32999-201ENSMUST00000192693 562 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Gm6621-201ENSMUST00000193251 772 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Gm31256-201ENSMUST00000194705 506 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.48□□□□□ -0.73
Sox17Q61473 Rprl1-202ENSMUST00000198476 238 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.48□□□□□ -0.73
Sox17Q61473 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sox17Q61473 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sox17Q61473 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sox17Q61473 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.48□□□□□ -0.73
Sox17Q61473 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sox17Q61473 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.48□□□□□ -0.73
Sox17Q61473 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.48□□□□□ -0.73
Sox17Q61473 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sox17Q61473 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sox17Q61473 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.47□□□□□ -0.73
Sox17Q61473 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.47□□□□□ -0.73
Sox17Q61473 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Sox17Q61473 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sox17Q61473 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sox17Q61473 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.47□□□□□ -0.73
Sox17Q61473 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms