Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ift88Q61371 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ift88Q61371 Snord17-201ENSMUST00000104526 238 ntBASIC12.42□□□□□ -0.42
Ift88Q61371 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.42□□□□□ -0.42
Ift88Q61371 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC12.42□□□□□ -0.42
Ift88Q61371 Gm13350-201ENSMUST00000120519 479 ntBASIC12.42□□□□□ -0.42
Ift88Q61371 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.42□□□□□ -0.42
Ift88Q61371 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Gm7584-201ENSMUST00000175829 940 ntBASIC12.42□□□□□ -0.42
Ift88Q61371 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Gm5996-201ENSMUST00000211110 718 ntBASIC12.42□□□□□ -0.42
Ift88Q61371 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.42□□□□□ -0.42
Ift88Q61371 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ift88Q61371 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ift88Q61371 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ift88Q61371 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ift88Q61371 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ift88Q61371 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ift88Q61371 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.42□□□□□ -0.42
Ift88Q61371 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ift88Q61371 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ift88Q61371 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ift88Q61371 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ift88Q61371 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm25148-201ENSMUST00000104611 123 ntBASIC12.41□□□□□ -0.42
Ift88Q61371 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ift88Q61371 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.41□□□□□ -0.42
Ift88Q61371 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm3150-201ENSMUST00000166418 204 ntBASIC12.41□□□□□ -0.42
Ift88Q61371 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.41□□□□□ -0.42
Ift88Q61371 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm8342-201ENSMUST00000209839 757 ntBASIC12.41□□□□□ -0.42
Ift88Q61371 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ift88Q61371 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.41□□□□□ -0.42
Ift88Q61371 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ift88Q61371 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ift88Q61371 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ift88Q61371 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.41□□□□□ -0.42
Ift88Q61371 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ift88Q61371 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ift88Q61371 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm13461-201ENSMUST00000120980 662 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Gm8199-201ENSMUST00000121323 823 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Gm15329-201ENSMUST00000121408 155 ntBASIC12.4□□□□□ -0.42
Ift88Q61371 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.4□□□□□ -0.42
Ift88Q61371 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ift88Q61371 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms