Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
ClpbQ60649 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ClpbQ60649 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
ClpbQ60649 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Gm11836-201ENSMUST00000121022 441 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.83□□□□□ -0.68
ClpbQ60649 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Gm44126-201ENSMUST00000204831 514 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Gm4978-201ENSMUST00000071565 801 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ClpbQ60649 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.83□□□□□ -0.68
ClpbQ60649 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ClpbQ60649 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm22711-201ENSMUST00000116890 133 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm13888-201ENSMUST00000119148 422 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm14665-201ENSMUST00000122294 557 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.82□□□□□ -0.68
ClpbQ60649 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm6485-201ENSMUST00000160676 439 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm21092-201ENSMUST00000178995 955 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm6439-201ENSMUST00000199849 862 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
ClpbQ60649 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
ClpbQ60649 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.82□□□□□ -0.68
ClpbQ60649 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ClpbQ60649 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms