Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm8302-201ENSMUST00000119217 852 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm24992-201ENSMUST00000157412 130 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Mir7051-201ENSMUST00000184167 73 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm9353-201ENSMUST00000200472 604 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Gm44551-201ENSMUST00000208804 171 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 AC122876.1-201ENSMUST00000217619 825 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.78□□□□□ -0.68
Xrcc1Q60596 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xrcc1Q60596 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Xrcc1Q60596 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm22138-201ENSMUST00000158748 128 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm42867-201ENSMUST00000202995 469 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.77□□□□□ -0.69
Xrcc1Q60596 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Xrcc1Q60596 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms