Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rnf20Q5DTM8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm12419-201ENSMUST00000116649 636 ntBASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Mir5120-201ENSMUST00000175020 78 ntBASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm23694-201ENSMUST00000179335 110 ntBASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf20Q5DTM8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf20Q5DTM8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf20Q5DTM8 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Snord17-201ENSMUST00000104526 238 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm8302-201ENSMUST00000119217 852 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm21778-201ENSMUST00000178779 471 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm5451-201ENSMUST00000080545 579 ntBASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf20Q5DTM8 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms